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Intron Name: Anas_platyrhynchos_platyrhynchos_1_23708191_23709367_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23708191 - 23709367

Intron Length:

1177

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

TATTGTATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTAAC

U12 Branch Point Sequence:

CTTTGTTGAATC

Flanking Amino Acid:

LSASGPSSFNQCSQCFQMLT

Intron Amino Acid Position:

364

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

75.5

34.3

Major BPS

75.8

0.64

0.9

75.6

25.3

Major PPT

81.6

0.71

0.9

78.3

39.6

Minor 5ss

38.2

-1.3

2.8

51.4

39.2

Minor BPS

52.9

0.07

1.9

66.43

40.1

Associated Gene:

Gene:

CPED1

Ensembl Gene ID:

ENSAPLG00000000584

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017083

23628591 - 23772611

144021

ENSAPLT00000000864

23626999 - 23772611

145613

ENSAPLT00000028891

23626999 - 23772611

145613

ENSAPLT00000024397

23626999 - 23772611

145613