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Intron Name: Anas_platyrhynchos_platyrhynchos_1_23709511_23721828_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23709511 - 23721828

Intron Length:

12318

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATGT

5'SS Class:

strong_major

3'SS Sequence:

ATCTTTTTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

ATCTTTTTCACA

Flanking Amino Acid:

PPKKKHFSVKLQKFFEMFFK

Intron Amino Acid Position:

317

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

74.9

36.1

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

84.3

0.77

0.8

79.6

31.8

Minor 5ss

-1.2

3.2

56.6

47.5

Minor BPS

57.9

0.24

1.7

68.42

38.7

Associated Gene:

Gene:

CPED1

Ensembl Gene ID:

ENSAPLG00000000584

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017083

23628591 - 23772611

144021

ENSAPLT00000000864

23626999 - 23772611

145613

ENSAPLT00000028891

23626999 - 23772611

145613

ENSAPLT00000024397

23626999 - 23772611

145613