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Intron Name: Anas_platyrhynchos_platyrhynchos_1_23723380_23735629_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23723380 - 23735629

Intron Length:

12250

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTTAA

5'SS Class:

strong_major

3'SS Sequence:

CGTACTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CCCTTCGTACTT

Flanking Amino Acid:

GLCQITKVFSDLKLPVATPE

Intron Amino Acid Position:

208

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

1.1

80.2

30.6

Major BPS

66.3

0.4

1.1

41.8

Major PPT

0.68

0.9

76.6

37.4

Minor 5ss

45.1

-0.5

2.6

58.1

46.5

Minor BPS

-0.3

2.2

57.74

46.4

Associated Gene:

Gene:

CPED1

Ensembl Gene ID:

ENSAPLG00000000584

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017083

23628591 - 23772611

144021

ENSAPLT00000000864

23626999 - 23772611

145613

ENSAPLT00000028891

23626999 - 23772611

145613

ENSAPLT00000024397

23626999 - 23772611

145613