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Intron Name: Anas_platyrhynchos_platyrhynchos_1_23771576_23772054_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

23771576 - 23772054

Intron Length:

479

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

TTTTTTTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATTTTTTATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

33.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

91.4

0.93

0.6

87.9

22.3

Minor 5ss

36.3

-1.6

2.7

38.8

40.3

Minor BPS

65.4

0.56

1.5

80.16

36.3

Associated Gene:

Gene:

CPED1

Ensembl Gene ID:

ENSAPLG00000000584

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030238

23736660 - 23772611

35952

ENSAPLT00000000864

23626999 - 23772611

145613