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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_23791688_23793763_R

Intron Information:

Intron Rank:
10
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
23791688 - 23793763
Intron Length:
2076

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTAAGAATG
5'SS Class:
strong_major
3'SS Sequence:
TCTATTTTTGTAG|T
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TCTCTAT
U12 Branch Point Sequence:
CTCTCTCTATTT
Flanking Amino Acid:
NEPRYCICNQCPIEWFHYGC
Intron Amino Acid Position:
369

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
92.6
1
0.8
84.6
33.3
Major BPS
61.2
0.28
1.4
60.7
45.4
Major PPT
84.6
0.78
0.7
80.7
31.2
Minor 5ss
37.1
-1.5
3
48.5
47.2
Minor BPS
48.6
-0
1.9
67.66
44.1

Associated Gene:

Gene:
ING3
Ensembl Gene ID:
ENSAPLG00000002016
Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000002247
23791571 - 23806918
15348