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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_23795795_23796948_R

Intron Information:

Intron Rank:
7
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
23795795 - 23796948
Intron Length:
1154

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTAATCTTA
5'SS Class:
strong_major
3'SS Sequence:
TCTGTTCATCAAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
ATTTCAT
U12 Branch Point Sequence:
TCATTTTGAATT
Flanking Amino Acid:
TSDASKENTPGCRNNSSSSS
Intron Amino Acid Position:
188

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
81.2
0.73
1
76.9
34.6
Major BPS
91.2
1.02
0.7
91.7
20.2
Major PPT
66.4
0.37
1.1
64.7
40.9
Minor 5ss
47.5
-0.2
2.8
64.9
46.3
Minor BPS
61
0.42
1.4
72.73
38.8

Associated Gene:

Gene:
ING3
Ensembl Gene ID:
ENSAPLG00000002016
Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000002247
23791571 - 23806918
15348