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Intron Name: Anas_platyrhynchos_platyrhynchos_1_23846467_23862499_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23846467 - 23862499

Intron Length:

16033

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTACGTTTC

5'SS Class:

major

3'SS Sequence:

CTGTTTTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAA

U12 Branch Point Sequence:

AATTTCAAAAGT

Flanking Amino Acid:

VKRNLLLLVWYFGSLLVIFC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

73.4

38.9

Major BPS

0.79

0.8

83.7

25.7

Major PPT

85.3

0.79

0.8

80.7

31.4

Minor 5ss

43.2

-0.7

52.6

44.7

Minor BPS

46.4

-0.2

2.1

67.96

42.7

Associated Gene:

Gene:

TSPAN12

Ensembl Gene ID:

ENSAPLG00000002596

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002646

23832814 - 23877490

44677

ENSAPLT00000028157

23845157 - 23877490

32334