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Intron Name: Anas_platyrhynchos_platyrhynchos_1_23866867_23870055_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23866867 - 23870055

Intron Length:

3189

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAGA

5'SS Class:

strong_major

3'SS Sequence:

CCTTCCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATTAT

U12 Branch Point Sequence:

TCTTGGTTAATC

Flanking Amino Acid:

THAWNFFQKEFKCCGVVYFT

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.8

33.7

Major BPS

72.1

0.55

1.1

62.3

43.7

Major PPT

85.5

0.8

0.7

25.3

Minor 5ss

32.8

-2

2.9

40.7

45.1

Minor BPS

51.5

0.03

2.4

69.44

42.9

Associated Gene:

Gene:

TSPAN12

Ensembl Gene ID:

ENSAPLG00000002596

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028157

23845157 - 23877490

32334

ENSAPLT00000002646

23832814 - 23877490

44677