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Intron Name: Anas_platyrhynchos_platyrhynchos_1_2398474_2400317_R

Intron Information:

Intron Rank:

130315

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2398474 - 2400317

Intron Length:

1844

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTTGCTC

5'SS Class:

weak_major

3'SS Sequence:

TTTTAAATGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATTGTTTTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.7

0.21

1.2

54.4

42.4

Major BPS

90.4

0.7

90.2

19.3

Major PPT

71.6

0.49

1.1

66.8

42.8

Minor 5ss

37.8

-1.4

3.2

51.4

45.3

Minor BPS

64.5

0.53

1.5

78.79

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017329

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022549

2397078 - 2401679

4602