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Intron Name: Anas_platyrhynchos_platyrhynchos_1_24821074_24823612_R

Intron Information:

Intron Rank:

137351

Intron Class:

major

Intron Phase:

Intron Coordinates:

24821074 - 24823612

Intron Length:

2539

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTAAGTAAG

5'SS Class:

major

3'SS Sequence:

CTTTTCCTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTGAA

U12 Branch Point Sequence:

TTTTCCTTACAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

1.3

77.9

38.6

Major BPS

49.7

-0

1.3

43.1

41.8

Major PPT

89.7

0.89

0.6

84.1

24.1

Minor 5ss

36.5

-1.5

2.7

41.7

38.2

Minor BPS

68.9

0.46

1.8

76.73

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021390

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038817

24820573 - 24824020

3448

ENSAPLT00000022385

24820573 - 24825266

4694