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Intron Name: Anas_platyrhynchos_platyrhynchos_1_2487596_2490494_F

Intron Information:

Intron Rank:

148154

Intron Class:

major

Intron Phase:

Intron Coordinates:

2487596 - 2490494

Intron Length:

2899

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGATA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TTCTTTGTTATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

80.5

33.7

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

86.8

0.83

0.8

81.8

34.6

Minor 5ss

41.9

-0.9

3.1

56.7

47.6

Minor BPS

46.8

-0.1

2.2

70.17

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029774

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042473

2486815 - 2492919

6105