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Intron Name: Anas_platyrhynchos_platyrhynchos_1_2487596_2491049_F

Intron Information:

Intron Rank:

148152

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2487596 - 2491049

Intron Length:

3454

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGATA

5'SS Class:

strong_major

3'SS Sequence:

TGATTTCAATAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

TTGATTTCAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

80.5

33.7

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

0.16

1.2

62.6

42.4

Minor 5ss

41.9

-0.9

3.1

56.7

47.6

Minor BPS

53.3

0.1

1.5

63.42

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029774

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033442

2486815 - 2492919

6105