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Intron Name: Anas_platyrhynchos_platyrhynchos_1_24896850_24898361_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24896850 - 24898361

Intron Length:

1512

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGCTAG

5'SS Class:

major

3'SS Sequence:

AACACTTCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TTTTTTTTAACA

Flanking Amino Acid:

LQKDLQTSASVHNRLEDLIT

Intron Amino Acid Position:

1371

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.1

59.9

41.8

Major BPS

87.3

0.93

0.8

36.5

Major PPT

62.2

0.28

0.9

58.8

37.2

Minor 5ss

45.4

-0.5

2.9

61.1

44.5

Minor BPS

86.3

1.14

0.8

90.59

23.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004753

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042442

24879758 - 24928030

48273

ENSAPLT00000023301

24880600 - 24928030

47431

ENSAPLT00000022133

24880600 - 24930625

50026

ENSAPLT00000004959

24880600 - 24930625

50026

ENSAPLT00000043135

24880600 - 24933179

52580