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Intron Name: Anas_platyrhynchos_platyrhynchos_1_24899689_24901465_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24899689 - 24901465

Intron Length:

1777

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATTAT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TATTCTTCATGT

Flanking Amino Acid:

KYEADKVEREGMVRQLQQEL

Intron Amino Acid Position:

1230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

86.4

23.9

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

89.2

0.88

0.7

88.9

28.2

Minor 5ss

41.2

-1

57.8

46.8

Minor BPS

49.3

0.03

2.1

73.17

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004753

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023301

24880600 - 24928030

47431

ENSAPLT00000022133

24880600 - 24930625

50026

ENSAPLT00000004959

24880600 - 24930625

50026

ENSAPLT00000043135

24880600 - 24933179

52580

ENSAPLT00000042442

24879758 - 24928030

48273