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Intron Name: Anas_platyrhynchos_platyrhynchos_1_24902423_24903607_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24902423 - 24903607

Intron Length:

1185

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

CCCTGTTGCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TGGCTATTTATT

Flanking Amino Acid:

TRITIGKNSEESDTNEREKD

Intron Amino Acid Position:

911

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.9

81.8

38.5

Major BPS

88.7

0.96

0.8

36.5

Major PPT

69.4

0.44

0.9

67.5

37.8

Minor 5ss

41.1

-1

2.9

57.9

46.4

Minor BPS

46.2

-0.2

1.8

62.79

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004753

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042442

24879758 - 24928030

48273

ENSAPLT00000023301

24880600 - 24928030

47431

ENSAPLT00000022133

24880600 - 24930625

50026

ENSAPLT00000004959

24880600 - 24930625

50026

ENSAPLT00000043135

24880600 - 24933179

52580