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Intron Name: Anas_platyrhynchos_platyrhynchos_1_24921433_24922592_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24921433 - 24922592

Intron Length:

1160

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACTTTCT

5'SS Class:

major

3'SS Sequence:

GCCTGTGTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACCAAT

U12 Branch Point Sequence:

TTTGTACCAATT

Flanking Amino Acid:

EEAESPWDSEIIQTDSDSLR

Intron Amino Acid Position:

480

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

74.5

36.6

Major BPS

64.1

0.35

1.2

33.2

Major PPT

66.5

0.37

57.1

43.3

Minor 5ss

41.8

-0.9

60.1

44.2

Minor BPS

44.7

-0.3

2.1

69.66

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004753

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042442

24879758 - 24928030

48273

ENSAPLT00000023301

24880600 - 24928030

47431

ENSAPLT00000022133

24880600 - 24930625

50026

ENSAPLT00000004959

24880600 - 24930625

50026

ENSAPLT00000043135

24880600 - 24933179

52580