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Intron Name: Anas_platyrhynchos_platyrhynchos_1_24922655_24923683_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24922655 - 24923683

Intron Length:

1029

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

CCACTCTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATAAAT

U12 Branch Point Sequence:

TCTTTGTCCACT

Flanking Amino Acid:

NASEDTAGEKSALPALGAEQ

Intron Amino Acid Position:

459

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

79.1

24.2

Major BPS

65.7

0.39

71.3

30.3

Major PPT

74.1

0.54

0.8

68.8

31.3

Minor 5ss

35.8

-1.6

2.8

40.3

40.1

Minor BPS

45.2

-0.3

2.5

71.07

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004753

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023301

24880600 - 24928030

47431

ENSAPLT00000022133

24880600 - 24930625

50026

ENSAPLT00000004959

24880600 - 24930625

50026

ENSAPLT00000043135

24880600 - 24933179

52580

ENSAPLT00000042442

24879758 - 24928030

48273