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Intron Name: Anas_platyrhynchos_platyrhynchos_1_25083724_25090180_F

Intron Information:

Intron Rank:

139534

Intron Class:

major

Intron Phase:

Intron Coordinates:

25083724 - 25090180

Intron Length:

6457

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTGACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

TTTTCTCTGACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

76.6

34.9

Major BPS

0.57

73.6

28.6

Major PPT

83.2

0.75

0.9

80.4

31.7

Minor 5ss

36.6

-1.5

2.9

46.4

44.2

Minor BPS

69.9

0.62

1.6

83.23

30.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025022

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022060

25079669 - 25090216

10548