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Intron Name: Anas_platyrhynchos_platyrhynchos_1_25170101_25175368_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

25170101 - 25175368

Intron Length:

5268

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCCTGC

5'SS Class:

weak_major

3'SS Sequence:

TGCTTTCTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TTTTCTATATGC

Flanking Amino Acid:

LAAAENRQKKLEMEKSQLQN

Intron Amino Acid Position:

310

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.35

1.3

55.2

45.1

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

85.5

0.8

79.8

32.3

Minor 5ss

48.7

-0.1

2.9

68.4

42.5

Minor BPS

49.6

-0

2.1

70.85

40.8

Associated Gene:

Gene:

CTTNBP2

Ensembl Gene ID:

ENSAPLG00000010400

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046269

25136170 - 25222947

86778

ENSAPLT00000010899

25136170 - 25222947

86778