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Intron Name: Anas_platyrhynchos_platyrhynchos_1_25267082_25268491_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25267082 - 25268491

Intron Length:

1410

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTGTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTGAA

U12 Branch Point Sequence:

AAAAATTGAACC

Flanking Amino Acid:

ILCVAIFLLEVVASLVMLYY

Intron Amino Acid Position:

878

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

23.7

Major BPS

70.6

0.51

0.9

61.4

36.2

Major PPT

84.6

0.78

0.8

79.1

32.9

Minor 5ss

32.8

-2

2.9

39.7

45.8

Minor BPS

47.4

-0.2

1.6

54.21

36.4

Associated Gene:

Gene:

CFTR

Ensembl Gene ID:

ENSAPLG00000011156

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047941

25230623 - 25314702

84080

ENSAPLT00000011736

25230460 - 25314702

84243