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Intron Name: Anas_platyrhynchos_platyrhynchos_1_25268621_25270222_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25268621 - 25270222

Intron Length:

1602

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

AACTCTTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

ATCTTATCAACT

Flanking Amino Acid:

TDEINEEDLKECFSDDAESM

Intron Amino Acid Position:

835

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

90.4

20.6

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

69.5

0.44

65.5

40.1

Minor 5ss

33.2

-1.9

3.4

48.7

47.5

Minor BPS

56.1

0.27

1.8

75.57

40.9

Associated Gene:

Gene:

CFTR

Ensembl Gene ID:

ENSAPLG00000011156

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047941

25230623 - 25314702

84080

ENSAPLT00000011736

25230460 - 25314702

84243