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Intron Name: Anas_platyrhynchos_platyrhynchos_1_25271873_25274547_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25271873 - 25274547

Intron Length:

2675

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TGAAATTTAATT

Flanking Amino Acid:

GGQRARITLARAVYKDADLY

Intron Amino Acid Position:

561

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.7

1.08

0.6

12.4

Major BPS

90.7

1.01

0.7

19.9

Major PPT

95.9

1.03

0.5

95.6

15.1

Minor 5ss

36.2

-1.6

2.9

50.6

45.9

Minor BPS

58.3

0.34

1.5

71.55

39.2

Associated Gene:

Gene:

CFTR

Ensembl Gene ID:

ENSAPLG00000011156

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047941

25230623 - 25314702

84080

ENSAPLT00000011736

25230460 - 25314702

84243