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Intron Name: Anas_platyrhynchos_platyrhynchos_1_25295704_25296587_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25295704 - 25296587

Intron Length:

884

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTACAT

U12 Branch Point Sequence:

TTTTCTTTTACA

Flanking Amino Acid:

IALFSLIYKKTLKLSSKVLD

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

89.8

23.7

Major BPS

0.37

1.3

Major PPT

95.6

1.03

0.5

91.4

20.1

Minor 5ss

46.2

-0.4

2.8

67.4

43.6

Minor BPS

77.6

0.86

1.5

87.29

30.4

Associated Gene:

Gene:

CFTR

Ensembl Gene ID:

ENSAPLG00000011156

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047941

25230623 - 25314702

84080

ENSAPLT00000011736

25230460 - 25314702

84243