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Intron Name: Anas_platyrhynchos_platyrhynchos_1_25416626_25426676_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25416626 - 25426676

Intron Length:

10051

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTATTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TACTCCTGAAAT

Flanking Amino Acid:

AVEFNPHVPKYLLEMKSLIL

Intron Amino Acid Position:

353

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

80.7

33.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

93.3

0.97

0.7

89.4

25.4

Minor 5ss

35.6

-1.6

2.8

42.7

38.3

Minor BPS

66.9

0.61

1.6

79.84

41.4

Associated Gene:

Gene:

ST7

Ensembl Gene ID:

ENSAPLG00000010396

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024222

25401449 - 25540897

139449

ENSAPLT00000039925

25401449 - 25466930

65482

ENSAPLT00000010858

25401449 - 25503482

102034

ENSAPLT00000035573

25401393 - 25466930

65538

ENSAPLT00000034889

25401449 - 25536409

134961

ENSAPLT00000028075

25401449 - 25466930

65482