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Intron Name: Anas_platyrhynchos_platyrhynchos_1_25565576_25566218_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25565576 - 25566218

Intron Length:

643

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTACC

5'SS Class:

major

3'SS Sequence:

TCTTCCCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTGAT

U12 Branch Point Sequence:

TGTGCTTGATAC

Flanking Amino Acid:

NDNLLREGAAHAFAQYNLDQ

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

72.9

36.6

Major BPS

66.1

0.4

1.3

59.3

47.1

Major PPT

86.6

0.82

0.7

24.1

Minor 5ss

39.2

-1.2

2.7

37.4

Minor BPS

45.6

-0.3

1.8

57.14

41.3

Associated Gene:

Gene:

CAPZA2

Ensembl Gene ID:

ENSAPLG00000021156

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046835

25553754 - 25582551

28798