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Intron Name: Anas_platyrhynchos_platyrhynchos_1_25619509_25620302_R


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
25619509 - 25620302

Intron Length:
794

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTCCATCAT

5'SS Class:
major

3'SS Sequence:
CCTCCCCTTTCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TAAACAT

U12 Branch Point Sequence:
TTTTCCAATATT

Flanking Amino Acid:
FWRRKNKQIKDLGSDLVRYD

Intron Amino Acid Position:
964

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
62
0.28
1.4
62.3
43.9

Major BPS
63.2
0.33
1.1
69.6
35.7

Major PPT
80.2
0.68
0.7
76.6
25.4

Minor 5ss
29.6
-2.3
3.1
41.5
44.9

Minor BPS
50.6
0.1
2.2
80.98
40.8

Associated Gene:

Gene:
MET

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

25608151 - 25678023
69873