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Intron Name: Anas_platyrhynchos_platyrhynchos_1_257309_271437_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

257309 - 271437

Intron Length:

14129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGATTG

5'SS Class:

strong_major

3'SS Sequence:

TGGGGCTCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

TGGTTCTCACCC

Flanking Amino Acid:

DPNFHDPDTGECPLTAAAQL

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.8

77.6

33.4

Major BPS

0.87

0.8

85.6

Major PPT

66.7

0.38

58.4

43.1

Minor 5ss

36.1

-1.6

3.2

46.6

48.7

Minor BPS

50.2

-0

1.8

62.78

42.8

Associated Gene:

Gene:

SHANK3

Ensembl Gene ID:

ENSAPLG00000008650

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009009

4776 - 289936

285161

ENSAPLT00000009001

4776 - 289936

285161