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Intron Name: Anas_platyrhynchos_platyrhynchos_1_25749602_25763883_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25749602 - 25763883

Intron Length:

14282

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTGATGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TGTTCTTTGATG

Flanking Amino Acid:

PKHLNDDVVKIDFEDVIAEP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

0.85

0.9

39.9

Major PPT

80.9

0.69

0.9

36.3

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

70.6

0.5

1.3

70.84

36.6

Associated Gene:

Gene:

CAV1

Ensembl Gene ID:

ENSAPLG00000001978

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001975

25749260 - 25764419

15160