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Intron Name: Anas_platyrhynchos_platyrhynchos_1_25764049_25764389_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25764049 - 25764389

Intron Length:

341

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGGACA

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCTC

U12 Branch Point Sequence:

TCTCCCCTCTCT

Flanking Amino Acid:

MSGTKYVDSEGFLYAAPVRE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

72.5

38.6

Major BPS

28.7

-1.3

4.1

59.2

39.1

Major PPT

78.2

0.63

0.7

72.8

25.2

Minor 5ss

31.5

-2.1

3.2

40.8

45.2

Minor BPS

37.9

-0.8

3.6

70.01

46.5

Associated Gene:

Gene:

CAV1

Ensembl Gene ID:

ENSAPLG00000001978

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001975

25749260 - 25764419

15160