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Intron Name: Anas_platyrhynchos_platyrhynchos_1_25873408_25876609_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25873408 - 25876609

Intron Length:

3202

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

AACCTCTTTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTAATAACC

Flanking Amino Acid:

KSADQKASQYSCYRCKLSMK

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

89.1

24.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.4

0.57

0.9

65.7

40.1

Minor 5ss

41.7

-0.9

2.8

41.5

Minor BPS

0.39

1.9

80.44

33.5

Associated Gene:

Gene:

TES

Ensembl Gene ID:

ENSAPLG00000012062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012572

25865447 - 25897799

32353

ENSAPLT00000027051

25869726 - 25898607

28882