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Intron Name: Anas_platyrhynchos_platyrhynchos_1_26451171_26456708_F

Intron Information:

Intron Rank:

127724

Intron Class:

major

Intron Phase:

Intron Coordinates:

26451171 - 26456708

Intron Length:

5538

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGACCT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTATAAC

U12 Branch Point Sequence:

TACTCTATAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.8

78.1

36.3

Major BPS

65.6

0.39

1.1

67.7

34.6

Major PPT

87.9

0.85

0.7

80.1

31.9

Minor 5ss

34.6

-1.8

3.2

49.1

46.6

Minor BPS

64.8

0.44

1.6

72.39

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018862

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041377

26426311 - 26458238

31928

ENSAPLT00000048395

26426311 - 26456868

30558