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Intron Name: Anas_platyrhynchos_platyrhynchos_1_2655050_2660086_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2655050 - 2660086

Intron Length:

5037

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

TTTGTCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATGGAC

U12 Branch Point Sequence:

CGGTGCCAAGCC

Flanking Amino Acid:

IINLKEAKTCTDWTAASRNE

Intron Amino Acid Position:

358

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.1

69.1

41.9

Major BPS

46.6

-0.2

1.3

44.4

38.7

Major PPT

79.6

0.67

0.8

74.1

31.1

Minor 5ss

38.1

-1.3

2.8

46.7

41.7

Minor BPS

36.1

-1

2.2

43.23

44.1

Associated Gene:

Gene:

PODXL

Ensembl Gene ID:

ENSAPLG00000003276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003337

2646837 - 2663876

17040

ENSAPLT00000041358

2622884 - 2663876

40993

ENSAPLT00000020062

2622884 - 2663876

40993