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Intron Name: Anas_platyrhynchos_platyrhynchos_1_2661285_2663234_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2661285 - 2663234

Intron Length:

1950

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGTGG

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCGCAGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTATTT

Flanking Amino Acid:

HQRFSQKKNQRLTEELQTME

Intron Amino Acid Position:

492

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

66.5

41.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

70.6

0.46

0.9

66.4

34.3

Minor 5ss

30.7

-2.2

3.2

37.8

47.1

Minor BPS

62.5

0.47

1.8

84.55

36.3

Associated Gene:

Gene:

PODXL

Ensembl Gene ID:

ENSAPLG00000003276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020062

2622884 - 2663876

40993