Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_2674697_2684421_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2674697 - 2684421

Intron Length:

9725

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACAAGG

5'SS Class:

major

3'SS Sequence:

TTCCTCCCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

TTTCCCTTCTCT

Flanking Amino Acid:

DHSDPEETKEDFQMSTTLTR

Intron Amino Acid Position:

586

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.2

66.4

45.1

Major BPS

66.3

0.4

1.1

41.8

Major PPT

73.5

0.53

0.7

66.2

30.1

Minor 5ss

38.4

-1.3

2.9

49.5

46.3

Minor BPS

-0.1

3.6

85.49

40.8

Associated Gene:

Gene:

MKLN1

Ensembl Gene ID:

ENSAPLG00000003364

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017816

2674640 - 2747145

72506