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Intron Name: Anas_platyrhynchos_platyrhynchos_1_2686941_2689496_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2686941 - 2689496

Intron Length:

2556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAGGG

5'SS Class:

strong_major

3'SS Sequence:

CTCGTTTGCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

GTTTCTTGATCT

Flanking Amino Acid:

HQLVYDELHKVHYLFGGNPG

Intron Amino Acid Position:

527

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

62.5

42.3

Major BPS

83.8

0.84

73.6

41.8

Major PPT

67.9

0.4

0.9

64.4

36.5

Minor 5ss

35.9

-1.6

3.3

47.1

48.3

Minor BPS

62.6

0.47

1.7

81.71

39.7

Associated Gene:

Gene:

MKLN1

Ensembl Gene ID:

ENSAPLG00000003364

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022860

2683448 - 2747145

63698

ENSAPLT00000017816

2674640 - 2747145

72506

ENSAPLT00000003506

2674575 - 2747145

72571