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Intron Name: Anas_platyrhynchos_platyrhynchos_1_271488_286910_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

271488 - 286910

Intron Length:

15423

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTATATAGG

5'SS Class:

major

3'SS Sequence:

AGAAGGTCTGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCAAAT

U12 Branch Point Sequence:

AAATGCTGAATG

Flanking Amino Acid:

IYMHTHIYMHKLLEKGLDPN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.1

0.4

1.1

61.4

Major BPS

62.1

0.3

1.2

67.3

37.8

Major PPT

57.3

0.17

1.1

47.3

45.1

Minor 5ss

42.3

-0.9

2.6

50.2

40.8

Minor BPS

48.3

-0.2

1.9

53.04

41.6

Associated Gene:

Gene:

SHANK3

Ensembl Gene ID:

ENSAPLG00000008650

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009009

4776 - 289936

285161

ENSAPLT00000009001

4776 - 289936

285161