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Intron Name: Anas_platyrhynchos_platyrhynchos_1_27437520_27439364_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

27437520 - 27439364

Intron Length:

1845

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTATGCCAG

5'SS Class:

weak_major

3'SS Sequence:

CCTTTCCATGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CTGTGATGAAAT

Flanking Amino Acid:

SVIGFCACLGFSSQTPFVTS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.9

0.21

1.1

47.1

42.7

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

74.7

0.56

0.8

70.2

29.6

Minor 5ss

45.9

-0.4

2.9

61.5

44.3

Minor BPS

44.2

-0.3

2.2

63.25

46.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044105

27437365 - 27439533

2169