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Intron Name: Anas_platyrhynchos_platyrhynchos_1_27580711_27585671_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27580711 - 27585671

Intron Length:

4961

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CTTAATCCACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTTTTCTTAATC

Flanking Amino Acid:

VGIDIVPAVESVYKCDFLNL

Intron Amino Acid Position:

259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

83.1

28.6

Major BPS

0.92

0.9

86.2

29.1

Major PPT

68.1

0.41

59.8

41.2

Minor 5ss

42.1

-0.9

2.5

53.5

43.9

Minor BPS

1.14

0.8

89.76

24.1

Associated Gene:

Gene:

BMT2

Ensembl Gene ID:

ENSAPLG00000012673

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013197

27553865 - 27587272

33408