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Intron Name: Anas_platyrhynchos_platyrhynchos_1_27609102_27612871_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27609102 - 27612871

Intron Length:

3770

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TTAATGTTAAAT

Flanking Amino Acid:

SHGTGEWALAGGDALRLDTL

Intron Amino Acid Position:

482

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

1.1

85.2

32.2

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

84.5

0.78

0.8

79.8

32.1

Minor 5ss

44.2

-0.6

3.3

66.9

44.4

Minor BPS

51.1

0.11

2.2

74.62

41.7

Associated Gene:

Gene:

TMEM168

Ensembl Gene ID:

ENSAPLG00000018062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044598

27594818 - 27613419

18602