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Intron Name: Anas_platyrhynchos_platyrhynchos_1_27689746_27689826_F

Intron Information:

Intron Rank:

139890

Intron Class:

major

Intron Phase:

Intron Coordinates:

27689746 - 27689826

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAGT

5'SS Class:

strong_major

3'SS Sequence:

ATTGCTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGAAAT

U12 Branch Point Sequence:

TGAAATAGAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

0.8

80.6

33.8

Major BPS

59.4

0.23

1.2

65.3

38.6

Major PPT

0.68

0.8

77.9

35.9

Minor 5ss

29.7

-2.3

40.4

45.3

Minor BPS

40.2

-0.6

1.8

55.38

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025203

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047445

27687343 - 27690216

2874