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Intron Name: Anas_platyrhynchos_platyrhynchos_1_27703038_27705476_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

27703038 - 27705476

Intron Length:

2439

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

ATTATTATTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTTTTAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

81.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

77.6

0.62

0.9

75.3

38.8

Minor 5ss

-1.1

2.9

57.3

41.2

Minor BPS

84.4

1.16

0.9

93.73

26.7

Associated Gene:

Gene:

LSMEM1

Ensembl Gene ID:

ENSAPLG00000012853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013378

27697434 - 27705692

8259