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Intron Name: Anas_platyrhynchos_platyrhynchos_1_27717608_27718711_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27717608 - 27718711

Intron Length:

1104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTAAGTCTT

5'SS Class:

major

3'SS Sequence:

TTCTTTTGTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

TTAACATCAAAT

Flanking Amino Acid:

GTASVQARQACATCLGICCF

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.3

73.1

43.9

Major BPS

81.9

0.79

0.8

81.9

Major PPT

81.8

0.72

0.8

76.8

37.4

Minor 5ss

-0.9

3.1

63.9

40.4

Minor BPS

49.7

0.06

1.9

73.37

42.2

Associated Gene:

Gene:

IFRD1

Ensembl Gene ID:

ENSAPLG00000012860

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027975

27712846 - 27729350

16505

ENSAPLT00000026183

27712846 - 27722537

9692

ENSAPLT00000013417

27712283 - 27722537

10255

ENSAPLT00000032359

27712846 - 27721992

9147