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Intron Name: Anas_platyrhynchos_platyrhynchos_1_27908101_27911937_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27908101 - 27911937

Intron Length:

3837

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GTG|GCAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

CTTTATCTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

CTTTCTTTATCT

Flanking Amino Acid:

WGTMWKQLYVRNEGDLFHRL

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

86.6

Major BPS

83.9

0.84

73.9

41.3

Major PPT

81.9

0.72

0.8

76.1

32.2

Minor 5ss

26.8

-2.7

3.6

35.1

34.5

Minor BPS

73.3

0.81

1.6

87.39

38.7

Associated Gene:

Gene:

DOCK4

Ensembl Gene ID:

ENSAPLG00000007085

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007462

27899352 - 28058111

158760