Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_27984629_27986134_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27984629 - 27986134

Intron Length:

1506

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTCCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAC

U12 Branch Point Sequence:

AGTATCTGACAT

Flanking Amino Acid:

KGANALSQLQAVFLSSFPSV

Intron Amino Acid Position:

755

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

81.6

33.2

Major BPS

72.6

0.56

0.9

63.1

35.8

Major PPT

80.9

0.69

0.7

73.6

31.5

Minor 5ss

45.5

-0.5

2.8

58.6

40.2

Minor BPS

45.5

-0.2

1.8

62.1

41.2

Associated Gene:

Gene:

DOCK4

Ensembl Gene ID:

ENSAPLG00000007085

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007462

27899352 - 28058111

158760