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Intron Name: Anas_platyrhynchos_platyrhynchos_1_28000413_28007425_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28000413 - 28007425

Intron Length:

7013

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAAGAT

U12 Branch Point Sequence:

TTTCTTTCCACA

Flanking Amino Acid:

DSFSTKEDLRDFLLQIFTVF

Intron Amino Acid Position:

940

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

81.4

32.7

Major BPS

58.6

0.22

1.1

55.1

40.4

Major PPT

87.8

0.85

0.6

83.8

24.5

Minor 5ss

35.6

-1.6

2.7

37.5

40.1

Minor BPS

-0

1.9

68.33

38.3

Associated Gene:

Gene:

DOCK4

Ensembl Gene ID:

ENSAPLG00000007085

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007462

27899352 - 28058111

158760