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Intron Name: Anas_platyrhynchos_platyrhynchos_1_28102109_28232968_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28102109 - 28232968

Intron Length:

130860

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGT|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

CTGTCTCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

TGATCCTTAATT

Flanking Amino Acid:

DVQRGDIVSLVLDKLCPPWH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

34.8

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

78.6

0.64

0.8

69.8

36.6

Minor 5ss

39.4

-1.2

2.9

52.2

44.4

Minor BPS

84.2

1.15

89.99

33.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025497

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023142

28089100 - 28233059

143960

ENSAPLT00000025357

28091810 - 28233059

141250