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Intron Name: Anas_platyrhynchos_platyrhynchos_1_28643305_28644192_F

Intron Information:

Intron Rank:

129526

Intron Class:

major

Intron Phase:

Intron Coordinates:

28643305 - 28644192

Intron Length:

888

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTATTGCACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

CCTCAATTAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

89.6

24.2

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

71.3

0.48

65.7

Minor 5ss

57.8

0.27

2.3

75.5

40.6

Minor BPS

50.9

0.01

1.8

62.11

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019709

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018938

28641156 - 28644603

3448