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Intron Name: Anas_platyrhynchos_platyrhynchos_1_28669207_28677634_F

Intron Information:

Intron Rank:

148075

Intron Class:

major

Intron Phase:

Intron Coordinates:

28669207 - 28677634

Intron Length:

8428

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACACTT

5'SS Class:

major

3'SS Sequence:

TTTCATTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTATTTTTCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

75.5

40.6

Major BPS

100

1.24

0.5

100

Major PPT

85.1

0.79

0.7

81.1

30.5

Minor 5ss

43.4

-0.7

3.2

65.6

45.4

Minor BPS

61.3

0.44

1.7

79.64

37.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043253

28669095 - 28677940

8846