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Intron Name: Anas_platyrhynchos_platyrhynchos_1_28752595_28760336_R

Intron Information:

Intron Rank:

141704

Intron Class:

major

Intron Phase:

Intron Coordinates:

28752595 - 28760336

Intron Length:

7742

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTGCTGAAATCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAA

U12 Branch Point Sequence:

CCTTGCTGAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

81.5

31.6

Major BPS

67.7

0.44

58.3

38.4

Major PPT

0.27

1.1

60.5

43.9

Minor 5ss

45.5

-0.5

2.5

56.3

43.3

Minor BPS

49.9

0.07

69.82

46.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023596

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031833

28751036 - 28760732

9697