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Intron Name: Anas_platyrhynchos_platyrhynchos_1_28839368_28852975_R

Intron Information:

Intron Rank:

154042

Intron Class:

major

Intron Phase:

Intron Coordinates:

28839368 - 28852975

Intron Length:

13608

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTGAGTGTT

5'SS Class:

major

3'SS Sequence:

ATTTGCTTTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAAGAT

U12 Branch Point Sequence:

AGATGCCTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

74.7

35.4

Major BPS

50.8

0.02

1.1

47.1

36.1

Major PPT

79.7

0.67

0.8

74.2

35.9

Minor 5ss

36.1

-1.6

3.5

45.5

Minor BPS

43.3

-0.4

2.2

60.84

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030367

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022077

28831546 - 28859296

27751